Skills (Embedded Use Cases)¶
BioMCP bundles reusable workflow documents as embedded skills.
Skills are available to both CLI users and MCP clients via resources.
List skills¶
Open a specific skill¶
By number:
By slug:
Install into an agent directory¶
Force replace existing files:
When no directory is provided, BioMCP attempts supported agent-directory detection.
Skill topics included¶
| # | Slug | Focus |
|---|---|---|
| 01 | variant-to-treatment |
Variant to treatment/evidence workflow |
| 02 | drug-investigation |
Drug mechanism, safety, alternatives |
| 03 | trial-searching |
Trial discovery + patient matching |
| 04 | rare-disease |
Rare disease evidence and trial strategy |
| 05 | drug-shortages |
Shortage monitoring and alternatives |
| 06 | advanced-therapies |
CAR-T/checkpoint therapy workflows |
| 07 | hereditary-cancer |
Hereditary syndrome workflows |
| 08 | resistance |
Resistance and next-line options |
| 09 | gene-function-lookup |
Gene-centric function and context lookup |
| 10 | gene-set-analysis |
Enrichment + pathway + interaction synthesis |
| 11 | literature-synthesis |
Evidence synthesis with cross-entity checks |
| 12 | pharmacogenomics |
PGx gene-drug interactions and dosing |
| 13 | phenotype-triage |
Symptom-first rare disease workup |
| 14 | protein-pathway |
Protein structure and pathway deep dive |
Relationship to MCP resources¶
The same use cases are readable through resources/list and resources/read with
biomcp://skill/<slug> URIs.